Wednesday, March 30, 2011

Planar Molecules.

Planar Molecules:

These constitute an important class of molecules characterized by having all of the atoms lying in a common plane which will be a symmetry element. We will consider the following four molecules:


Formaldehyde

t-Glyoxal

Ethene

Benzene

Linear Molecules-Gruop Theory

    Linear Molecules:

    We will examine two linear molecules:


    Chloromethane:

    Ethyne:

    (a) All linear molecules possess an axis lying along the line-of-centers of the atoms which is labeled Cinf because a rotation about this axis by any angle, which is some multiple of 360/inf, will produce an equivalent structure.

    All linear molecules also possess an infinite number of sv planes containing all of the atoms as well as the Cinf axis.

    (b) In addition to the above symmetry elements, a linear molecule may possess a center of symmetry, i.

    If the molecule has a center of symmetry it will also possess:
    (i) An infinite number of C2 axes passing through the center and perpendicular to the principal axis (Cinf).
    (ii) An improper axis, Sinf, corresponding to rotation about the Cinf axis followed by reflection in a plane passing through the center of symmetry and perpendicular to the Cinf axis.

Group Theory in Chemistry

Symmetry in Chemistry - Group Theory

Group Theory is one of the most powerful mathematical tools used in Quantum Chemistry and Spectroscopy. It allows the user to predict, interpret, rationalize, and often simplify complex theory and data.

At its heart is the fact that the Set of Operations associated with the Symmetry Elements of a molecule constitute a mathematical set called a Group. This allows the application of the mathematical theorems associated with such groups to the Symmetry Operations.


All Symmetry Operations associated with isolated molecules can be characterized as Rotations:

    (a) Proper Rotations: Cnk ; k = 1,......, n
    When k = n, Cnk = E, the Identity Operation
    n indicates a rotation of 360/n where n = 1,....
    (b) Improper Rotations: Snk , k = 1,....., n
    When k = 1, n = 1 Snk = s , Reflection Operation
    When k = 1, n = 2 Snk = i , Inversion Operation

In general practice we distinguish Five types of operation:
    (i) E, Identity Operation
    (ii) Cnk , Proper Rotation about an axis
    (iii) s, Reflection through a plane
    (iv) i, Inversion through a center
    (v) Snk, Rotation about an an axis followed by reflection through a plane perpendicular to that axis.

Each of these Symmetry Operations is associated with a Symmetry Element which is a point, a line, or a plane about which the operation is performed such that the molecule's orientation and position before and after the operation are indistinguishable.


The Symmetry Elements associated with a molecule are:

    (i) A Proper Axis of Rotation: Cn where n = 1,....
    This implies n-fold rotational symmetry about the axis.
    (ii) A Plane of Reflection: s
    This implies bilateral symmetry about the plane.
    These planes are further classified as:

    sh - Horizontal Plane which is perpendicular to the Principal Axis of Rotation (i.e. Axis with highest value of n). If no principal axis exists sh is defined as the molecular plane.

    sv or sd - Vertical Plane which contains the Principal Axis of Rotation and is perpendicular to a sh plane, if it exists. When both sv and sd planes are present, the sv planes contain the greater number of atoms, the sd planes contain bond angle bisectors. If only one type of vertical plane is present, sv or sd may be used depending on the total symmetry of the molecule.


    (iii) A Center of Inversion - i
    This is a central point through which all Cn and s elements must pass. If no such common point exists there is no center of symmetry.
    (iv) Improper Axis: Sn
    This is made up of two parts: Cn and sh both of which may or may not be true symmetry elements of the molecule. If both the Cn and the sh are present then Sn must also exist. The following relations are helpful in this regard:
    (a) If n is even, Snn = E
    (b) If n is odd, Snn = s and Sn2n = E
    (c) If m is even, Snm = Cnm when m < n
    Snm = Cnm-n when m > n
    (d) If Sn with even n exists then Cn/2 exists.
    (e) If Sn with odd n exists then both Cn and s perpendicular to Cn exist.


The key to applying Group Theory is to be able to identify the "Point Group" of the molecule i.e. its characteristic set of Symmetry Operations. The possible Symmetry Operations associated with a molecule are determined by the Symmetry Elements possessed by that molecule. Therefore the first step in applying Group Theory to molecular properties is to identify the complete set of Symmetry Elements possessed by the molecule. This requires the individual to visually identify the elements of symmetry in a 3-dimensional object. Experience has shown that this is often the most difficult step for a beginner.

In the following we will use "GIF" images, appropriately annotated to help the beginner become competent at identifying the symmetry elements in a molecule. The user can also access the Molecular Visualization Program utilizing "RASMOL v 2.5" to view 3-Dimensional images of the molecules.


Molecules can be categorized as:

Knowing the Symmetry Elements of the molecule we can now use the following flow chart to determine the molecular point group.

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